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pyhrf.vbjde.vem_bold_constrained module

VEM BOLD Constrained

File that contains function for BOLD data analysis with positivity and l2-norm=1 constraints.

It imports functions from vem_tools.py in pyhrf/vbjde

pyhrf.vbjde.vem_bold_constrained.Main_vbjde_Extension_constrained(graph, Y, Onsets, Thrf, K, TR, beta, dt, scale=1, estimateSigmaH=True, sigmaH=0.05, NitMax=-1, NitMin=1, estimateBeta=True, PLOT=False, contrasts=[], computeContrast=False, gamma_h=0, estimateHRF=True, TrueHrfFlag=False, HrfFilename='hrf.nii', estimateLabels=True, LabelsFilename='labels.nii', MFapprox=False, InitVar=0.5, InitMean=2.0, MiniVEMFlag=False, NbItMiniVem=5)
pyhrf.vbjde.vem_bold_constrained.Main_vbjde_Extension_constrained_stable(graph, Y, Onsets, Thrf, K, TR, beta, dt, scale=1, estimateSigmaH=True, sigmaH=0.05, NitMax=-1, NitMin=1, estimateBeta=True, PLOT=False, contrasts=[], computeContrast=False, gamma_h=0)

Version modified by Lofti from Christine’s version

pyhrf.vbjde.vem_bold_constrained.Main_vbjde_Python_constrained(graph, Y, Onsets, Thrf, K, TR, beta, dt, scale=1, estimateSigmaH=True, sigmaH=0.1, NitMax=-1, NitMin=1, estimateBeta=False, PLOT=False)